Introduction to
Protein Structure Bioinformatics 2004

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Schedule and teachers

Location: room 103 (theory) and room 105 (exercises), Biozentrum, Basel

Time

Topic

Teacher

Mo Sep 27

DAY 1

 

9:00-12:00

Theory
Introduction: Principles of protein structures

Torsten Schwede

13:00-17:00

Exercises
Visualization and Analysis of Protein Structure: spdb-viewer

Lorenza Bordoli

Tu Sep 28

DAY 2

 

9:00-11:00

Theory: 
X-Ray Crystallography

Sergei Strelkov

11:00-13:00

Theory: 
NMR Spectroscopy

Daniel Haeussinger

14:00-17:00

Exercises
Visualization and Analysis of Protein Structure

Lorenza Bordoli

19:00- ...

Social dinner [city map link] [transposrts map]

 

We Sep 29

DAY 3

 

9:00-11:00

Theory: 
Molecular Dynamics and Molecular Modeling

Olivier Michielin

11:00-13:00

Exercises:
Molecular Dynamics and Molecular Modeling

Olivier Michielin

14:00-16:00

Theory: 
Secondary Structure Prediction, Fold Recognition, Threading

Lorenza Bordoli

16:00-18:00

Exercises: 
Secondary Structure Prediction, Fold Recognition, Threading

Lorenza Bordoli

Th Sep 30

DAY 4

 

9:00-11:00

Theory: 
Homolgy Modeling

Torsten Schwede

11:00-13:00

Theory: 
How to search and correct align the target and the template

Laurent Falquet

14:00-17:00

Exercises: 
Homolgy Modeling

Torsten Schwede
Lorenza Bordoli

Fr Oct 1

DAY 5

 

9:00-12:00

Theory + Exercises: 
High quality Imaging (for publications)

Ansgar Philippsen

13:00-18:00

Presentations of users problems

End of the course. Farewell.

Staff