Phylogeny and Evolution using Bioinformatics

Course materials

Printed copies of all lecture handouts are distributed at the beginning of the course!

  • Phylogenic trees, Parsimony, Distance methods (pdf)
  • Markov models in molecular phylogeny and evolution (pdf)
  • Likelihood methods (pdf)
  • Bayesian methods (pdf)


    Links to the softwares used during the course :
  • MEGA: Molecular Evolutionary Genetics Analysis
  • Jalview: a multiple alignment editor
  • Phylogenetic Analysis by Maximum Likelihood (PAML)
  • NJplot
  • PhyML
  • Phylip/DNAMl
  • MrBayes

  • List of virtually all phylogeny programs

  • Evalutation

  • Course Evaluation