Pretty Printing and Shading of Multiple-Alignment filesYou can also download pyBoxshade, a desktop application for colouring/shading sequence alignments: https://github.com/mdbaron42/pyBoxshade This server uses version 3.21 of BOXSHADE, written by K. Hofmann and M. Baron. BOXSHADE is in the public domain and available from Source Forge http://sourceforge.net/projects/boxshade/This server takes a multiple-alignment file in either GCG's MSF-format or Clustal ALN-format.
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